Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2931

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11298 and 11299 are separated by 313 nucleotides11299 and 11300 are separated by 232 nucleotides11300 and 11301 are separated by 159 nucleotides mRNA_2930: 11298 - Interpro Nbl1 / Borealin N terminal, at 578,176 to 578,978 11298 mRNA_2931: 11299 - K06676 BRRN1, BRN1, CAPH condensin complex subunit 2, at 579,292 to 582,332 11299 mRNA_2932: 11300 - Hypothetical Protein, at 582,565 to 583,032 11300 mRNA_2933: 11301 - Hypothetical Protein, at 583,192 to 584,593 11301

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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579,033 + +0.8
579,197 - +0.3
579,205 - +0.1
579,214 + +0.8
582,367 - -0.6
582,397 - +0.1
582,616 + 11300 mRNA_2932 0.11 +0.1
582,830 + 11300 mRNA_2932 0.57 -0.3
582,831 - 11300 mRNA_2932 0.57 +0.0
582,977 + 11300 mRNA_2932 0.88 +1.0
583,075 - +0.3
583,110 - -0.3
583,117 - +0.9
583,120 - +2.1

Or see this region's nucleotide sequence