Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3194

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_3194: 11562 - Hypothetical Protein, at 58,492 to 59,376 11562

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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57,541 - +0.3
57,541 - +0.5
57,542 + +0.2
57,570 - +1.2
57,606 + +0.2
57,777 + -0.6
57,781 - +1.5
57,883 - +1.8
57,934 + +0.6
58,185 + +0.6
58,185 + -0.9
58,316 + +1.0
58,320 + -1.3
58,325 - +1.8
58,594 + 11562 mRNA_3194 0.12 +0.3
58,675 + 11562 mRNA_3194 0.21 +0.1
58,887 - 11562 mRNA_3194 0.45 +0.3
58,927 - 11562 mRNA_3194 0.49 +0.7
59,056 + 11562 mRNA_3194 0.64 -1.8
59,157 - 11562 mRNA_3194 0.75 +0.4
59,315 - +1.3
59,342 + +0.5
59,465 - +0.6
59,486 - -0.8
59,490 + +0.1
59,500 + +1.0
59,506 - +0.3
59,614 - +0.5
59,621 + +1.5
59,623 - +1.1
59,624 - +2.6
59,743 + +0.5
59,871 - +0.6
60,061 + +0.4
60,068 - +1.6
60,230 - -1.0
60,257 + -0.2

Or see this region's nucleotide sequence