Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3412

Experiment: YNB Glucose 75mM Arginine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11779 and 11780 are separated by 547 nucleotides11780 and 11781 are separated by 341 nucleotides mRNA_3411: 11779 - SUPERFAMILY--SSF81296, at 29,914 to 31,700 11779 mRNA_3412: 11780 - KOG0548 Molecular co-chaperone STI1, at 32,248 to 34,426 11780 mRNA_3413: 11781 - K00622 nat arylamine N-acetyltransferase, at 34,768 to 35,867 11781

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
remove
34,439 + -0.4
34,439 + +0.3
34,456 - +1.5
34,577 - +0.3
34,589 + +0.5
34,596 + +0.5
34,733 - +0.1
34,737 + -1.3
34,747 - +2.7
34,862 + -0.6
34,873 + +2.0
34,879 + 11781 mRNA_3413 0.10 +1.2
34,893 + 11781 mRNA_3413 0.11 +0.1
34,895 - 11781 mRNA_3413 0.12 +0.4
34,903 + 11781 mRNA_3413 0.12 +2.0
35,019 - 11781 mRNA_3413 0.23 +0.8
35,184 - 11781 mRNA_3413 0.38 +0.5
35,303 - 11781 mRNA_3413 0.49 +1.8

Or see this region's nucleotide sequence