Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4351

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_4351: 12719 - BLAST clampless1 Clp1 protein [Rhizoctonia solani], at 11,063 to 11,629 12719

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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11,306 + 12719 mRNA_4351 0.43 +0.0
11,361 + 12719 mRNA_4351 0.53 +1.0
11,461 + 12719 mRNA_4351 0.70 -0.6
11,675 + -0.2
11,703 - -0.9
11,744 + -0.7
11,751 + +0.7
11,789 + +1.5
11,794 - -1.2
11,830 - +0.3
11,835 - -0.2
11,863 - +0.2
11,866 - +0.8
11,878 - -0.6
11,905 - +1.6
11,990 + +1.5
12,034 - +0.2
12,034 - -0.2
12,035 - +0.4
12,037 - -0.2
12,042 - +0.9
12,042 - +2.0
12,054 - +2.5
12,055 - +1.2
12,058 - +0.5
12,059 - -0.8
12,061 - -0.3
12,156 + -0.3
12,174 - -1.1
12,174 - +0.1
12,178 + -1.3
12,189 - -0.2
12,208 - +0.1
12,211 - -0.0
12,213 - +1.6
12,264 + +0.7
12,282 - -0.2
12,307 - +1.6
12,334 + +0.4
12,336 + +0.4
12,337 + -0.1
12,345 - +0.5
12,348 + -0.7
12,348 - -1.5
12,380 + -1.1
12,385 + +1.6
12,466 + +0.7
12,473 + +1.2
12,477 + +2.5
12,482 + +0.1
12,487 - -0.2
12,511 - -0.1
12,534 - +1.1
12,578 - +0.3
12,628 + +1.2

Or see this region's nucleotide sequence