Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4791

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13159 and 13160 are separated by 940 nucleotides mRNA_4791: 13159 - ProSiteProfiles-BTB domain profile.-PS50097, at 1,021,577 to 1,022,865 13159 mRNA_4792: 13160 - Hypothetical Protein, at 1,023,806 to 1,024,351 13160

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,020,628 + +1.4
1,020,742 + +1.5
1,021,367 - +0.5
1,021,455 - +0.7
1,021,910 + 13159 mRNA_4791 0.26 +0.3
1,022,383 + 13159 mRNA_4791 0.63 -2.4
1,022,536 + 13159 mRNA_4791 0.74 +2.7
1,022,557 - 13159 mRNA_4791 0.76 -0.5
1,022,586 - 13159 mRNA_4791 0.78 -0.0
1,022,689 - 13159 mRNA_4791 0.86 +0.0
1,023,135 - +0.4
1,023,154 + +0.0
1,023,295 + +1.3
1,023,414 - +1.3
1,023,429 + +0.5
1,023,448 + +0.3
1,023,525 - -0.7
1,023,707 - -0.3

Or see this region's nucleotide sequence