Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4995

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13362 and 13363 are separated by 202 nucleotides13363 and 13364 are separated by 137 nucleotides mRNA_4994: 13362 - K09568 FKBP1 FK506-binding protein 1, at 1,497,335 to 1,498,309 13362 mRNA_4995: 13363 - Hypothetical Protein, at 1,498,512 to 1,499,346 13363 mRNA_4996: 13364 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 1,499,484 to 1,500,162 13364

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,497,518 - 13362 mRNA_4994 0.19 +1.2
1,497,522 - 13362 mRNA_4994 0.19 +0.6
1,497,524 - 13362 mRNA_4994 0.19 -0.7
1,497,707 + 13362 mRNA_4994 0.38 -0.3
1,497,879 - 13362 mRNA_4994 0.56 +0.8
1,498,149 + 13362 mRNA_4994 0.83 -0.3
1,498,155 + 13362 mRNA_4994 0.84 +0.2
1,498,288 + +1.4
1,498,424 - -0.2
1,498,433 + -1.4
1,498,441 - +1.2
1,498,470 + -1.3
1,498,560 - +0.5
1,498,567 - +0.1
1,498,727 - 13363 mRNA_4995 0.26 -0.8
1,499,029 + 13363 mRNA_4995 0.62 +0.1
1,499,160 + 13363 mRNA_4995 0.78 +0.9
1,499,339 - +0.7
1,499,443 - +0.4
1,499,467 - +0.2
1,499,475 + +1.6
1,500,181 - -0.7
1,500,189 - +0.1
1,500,194 + +0.3
1,500,198 - -1.0
1,500,207 + -0.3
1,500,209 + -0.4
1,500,211 + -0.0
1,500,212 - +0.9
1,500,214 - +0.3
1,500,220 - +0.1
1,500,229 + +1.3

Or see this region's nucleotide sequence