Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5002

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13370 and 13371 are separated by 614 nucleotides mRNA_5002: 13370 - K02981 RP-S2e, RPS2 small subunit ribosomal protein S2e, at 1,513,605 to 1,514,626 13370 mRNA_5003: 13371 - Hypothetical Protein, at 1,515,241 to 1,515,824 13371

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,512,830 - +1.2
1,512,964 + -0.1
1,512,971 + -0.1
1,512,988 - -0.1
1,513,000 + +1.9
1,513,002 + +1.1
1,513,009 + -1.4
1,513,012 + -0.5
1,514,800 - +0.3
1,514,811 + -0.2
1,514,829 + +2.0
1,514,941 - +1.6
1,514,958 - -0.6
1,514,959 + +0.7
1,514,988 - +1.1
1,514,988 - +0.4
1,515,124 + +0.4
1,515,125 + +0.3
1,515,149 - +0.9
1,515,156 - -0.1
1,515,173 + -0.7
1,515,175 + +0.7
1,515,175 - -1.1
1,515,181 + -0.3
1,515,182 + +0.1
1,515,205 - +0.5
1,515,206 - +0.5
1,515,267 + +1.4
1,515,306 + 13371 mRNA_5003 0.11 -0.6
1,515,364 + 13371 mRNA_5003 0.21 +0.8
1,515,530 - 13371 mRNA_5003 0.49 -1.2
1,515,553 - 13371 mRNA_5003 0.53 +0.3
1,515,626 + 13371 mRNA_5003 0.66 +0.8
1,515,626 + 13371 mRNA_5003 0.66 -0.5

Or see this region's nucleotide sequence