Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5353

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13720 and 13721 are separated by 754 nucleotides mRNA_5352: 13720 - KOG1674 Cyclin, at 522,797 to 523,590 13720 mRNA_5353: 13721 - Hypothetical Protein, at 524,345 to 526,185 13721

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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523,817 - +1.4
524,023 - +0.6
524,093 - +1.2
524,175 + -0.1
524,338 - +0.2
524,352 + -0.1
524,504 - -0.6
524,668 + 13721 mRNA_5353 0.18 -0.7
524,916 - 13721 mRNA_5353 0.31 +0.5
524,935 + 13721 mRNA_5353 0.32 -1.9
525,323 + 13721 mRNA_5353 0.53 +1.4
525,356 - 13721 mRNA_5353 0.55 +1.6
525,518 - 13721 mRNA_5353 0.64 -1.6
525,519 + 13721 mRNA_5353 0.64 +0.1
525,607 + 13721 mRNA_5353 0.69 -1.0
525,691 - 13721 mRNA_5353 0.73 +0.7
525,790 - 13721 mRNA_5353 0.78 -1.1
525,964 + 13721 mRNA_5353 0.88 -0.9
526,243 + -0.1
526,251 - +0.9
526,285 - +1.1
526,439 + +0.9
526,973 - +0.3
526,978 - +1.1
527,080 - -0.3
527,122 - +0.8
527,125 + +2.6
527,128 - +0.6
527,143 + +0.4
527,159 - -0.8

Or see this region's nucleotide sequence