Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5740

Experiment: YNB Glucose 75mM Arginine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14107 and 14108 are separated by 448 nucleotides mRNA_5739: 14107 - K05692 ACTB_G1 actin beta/gamma 1, at 818,147 to 820,488 14107 mRNA_5740: 14108 - K00121 frmA, ADH5, adhC S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase, at 820,937 to 822,719 14108

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
remove
821,474 - 14108 mRNA_5740 0.30 -0.6
821,598 + 14108 mRNA_5740 0.37 +0.1
822,906 - -0.7
822,908 - +1.9
822,911 - +0.4
822,919 - -0.7
822,925 - +0.2
822,927 - +2.9
822,941 - -0.6

Or see this region's nucleotide sequence