Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5768

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14135 and 14136 are separated by 833 nucleotides mRNA_5767: 14135 - K02606 ORC4 origin recognition complex subunit 4, at 890,785 to 894,210 14135 mRNA_5768: 14136 - Hypothetical Protein, at 895,044 to 899,242 14136

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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894,316 - +0.1
894,321 - +0.1
894,366 + -0.5
894,375 - +0.4
894,483 + -0.6
894,672 + +0.0
894,676 - -0.8
894,960 + +1.0
895,054 + +2.5
895,111 - -1.3
895,231 - +0.2
895,815 - 14136 mRNA_5768 0.18 -0.8
895,937 - 14136 mRNA_5768 0.21 -0.0
895,956 + 14136 mRNA_5768 0.22 +1.9
896,136 - 14136 mRNA_5768 0.26 +0.3
896,258 - 14136 mRNA_5768 0.29 +2.0
896,413 + 14136 mRNA_5768 0.33 +1.6
896,865 + 14136 mRNA_5768 0.43 +0.9
897,105 - 14136 mRNA_5768 0.49 +0.1
897,144 + 14136 mRNA_5768 0.50 -0.6
897,734 - 14136 mRNA_5768 0.64 +0.3
897,855 - 14136 mRNA_5768 0.67 -0.4
897,903 - 14136 mRNA_5768 0.68 +1.0
898,060 - 14136 mRNA_5768 0.72 +1.9
898,776 - 14136 mRNA_5768 0.89 +3.0
898,838 - -1.6
898,924 + -0.7
898,943 + -1.3
899,187 - -0.2
899,207 + -0.3
899,272 + -0.1
899,521 - +0.3
899,546 + -1.5
900,216 - -0.1

Or see this region's nucleotide sequence