Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5984

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14352 and 14353 are separated by 349 nucleotides mRNA_5984: 14352 - Hypothetical Protein, at 1,380,617 to 1,381,762 14352 mRNA_5985: 14353 - Hypothetical Protein, at 1,382,112 to 1,383,280 14353

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,379,663 + +1.3
1,379,668 + -0.4
1,379,672 - +0.8
1,379,684 - -0.1
1,379,788 - +0.5
1,380,025 - -0.5
1,380,104 - +0.1
1,380,435 + -1.8
1,380,514 + +0.7
1,380,525 - -0.0
1,380,534 - -0.6
1,380,691 - -0.2
1,380,694 + -0.4
1,380,718 - +0.7
1,380,882 + 14352 mRNA_5984 0.23 +0.2
1,380,891 + 14352 mRNA_5984 0.24 +1.0
1,380,986 - 14352 mRNA_5984 0.32 +0.5
1,380,992 + 14352 mRNA_5984 0.33 -0.1
1,381,118 - 14352 mRNA_5984 0.44 +1.6
1,381,124 + 14352 mRNA_5984 0.44 -0.4
1,381,320 - 14352 mRNA_5984 0.61 +0.1
1,381,680 + -0.0
1,381,738 + +1.9
1,381,741 + -0.7
1,381,866 - -1.0
1,381,880 + -0.4
1,382,005 - -0.1
1,382,176 - +0.1
1,382,342 + 14353 mRNA_5985 0.20 +0.5
1,382,656 + 14353 mRNA_5985 0.47 -0.3

Or see this region's nucleotide sequence