Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6140

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6140: 14508 - K20463 OSBPL3_6_7, ORP3_6_7 oxysterol-binding protein-related protein 3/6/7, at 102,447 to 105,557 14508

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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101,595 - -0.5
101,866 + +0.8
102,058 - +0.6
102,174 + +0.2
102,245 - -0.4
102,642 + -0.4
102,770 + 14508 mRNA_6140 0.10 -0.6
103,014 - 14508 mRNA_6140 0.18 +0.8
103,108 + 14508 mRNA_6140 0.21 +0.9
103,144 + 14508 mRNA_6140 0.22 +0.3
103,166 + 14508 mRNA_6140 0.23 -0.1
103,398 + 14508 mRNA_6140 0.31 +1.4
103,996 - 14508 mRNA_6140 0.50 +0.5
104,080 - 14508 mRNA_6140 0.52 +1.7
104,347 + 14508 mRNA_6140 0.61 +0.2
105,349 + +0.8
105,453 - -0.5
105,482 - -1.3
105,505 - +0.6
105,648 + -0.1
105,657 + +0.7
105,769 - -0.9
105,791 - +0.6
105,801 - +0.2
105,818 + -0.5
105,823 + -0.2
105,825 - +1.9
105,829 - +0.6
105,830 + -0.3
105,839 - +0.8
105,841 - +0.6
105,842 + +2.1
105,850 - +1.1
105,851 + +1.2
105,851 + +0.3
105,858 + +1.0
105,867 - +1.8
105,871 - -1.7
105,882 - -0.4
105,996 + +0.8
106,003 + +0.4
106,080 - -1.1
106,316 - +0.4

Or see this region's nucleotide sequence