Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6234

Experiment: YNB Glucose 75mM Arginine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14602 and 14603 are separated by 416 nucleotides mRNA_6234: 14602 - K00318 PRODH proline dehydrogenase, at 315,731 to 317,718 14602 mRNA_6235: 14603 - K17279 REEP5_6 receptor expression-enhancing protein 5/6, at 318,135 to 318,876 14603

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
remove
315,055 - -2.0
315,070 + +0.9
315,070 + +0.8
315,335 + -3.3
315,342 - +0.0
315,345 - +1.1
315,346 + +0.5
315,346 + +0.7
315,372 - +2.1
315,381 - +1.3
315,385 - +1.1
315,486 + -1.1
315,517 + -0.8
315,527 + +2.0
315,539 + +0.4
315,578 - +0.4
315,638 - -0.2
315,652 - +0.5
315,656 - +0.8
315,662 + -0.2
315,665 + +1.4
315,665 - -0.4
315,667 - -0.8
315,670 + -0.4
315,671 + +0.3
315,673 + +0.5
315,673 + +0.4
315,676 + +0.7
315,686 - +0.2
315,939 - 14602 mRNA_6234 0.10 -0.6
315,967 + 14602 mRNA_6234 0.12 +0.5
315,986 + 14602 mRNA_6234 0.13 -0.7
316,121 + 14602 mRNA_6234 0.20 +1.7
316,392 - 14602 mRNA_6234 0.33 +0.6
316,418 + 14602 mRNA_6234 0.35 -1.3
316,850 - 14602 mRNA_6234 0.56 -0.7
316,874 + 14602 mRNA_6234 0.57 +0.4
316,880 + 14602 mRNA_6234 0.58 +0.8
317,036 - 14602 mRNA_6234 0.66 +0.3
317,036 - 14602 mRNA_6234 0.66 +0.0
317,601 + +0.9
317,770 - -1.1

Or see this region's nucleotide sequence