Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6245

Experiment: YNB Glucose 75mM Arginine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6245: 14613 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445, at 343,220 to 344,409 14613

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
remove
342,264 + +0.2
342,309 - +0.8
342,428 + +0.4
342,453 + +1.2
342,463 + -0.2
342,469 + +1.0
342,470 - +3.1
342,607 - -0.8
342,609 - +1.1
342,621 + -0.1
342,659 - +0.4
342,760 - -0.6
342,778 + +0.7
342,797 + +1.1
342,828 - -0.1
342,886 + +0.3
342,922 + +0.2
342,941 + +0.3
342,963 - -0.3
342,971 + +1.0
342,988 - -0.6
343,679 + 14613 mRNA_6245 0.39 +0.8
343,982 + 14613 mRNA_6245 0.64 +1.3
344,406 + +0.7
344,865 + +1.1
345,166 - +1.5
345,186 + +0.2
345,190 + +0.2
345,341 + +0.1
345,360 - +0.2
345,374 - -1.0
345,384 - -0.2
345,392 + -1.0
345,395 - +0.2
345,407 - +1.3

Or see this region's nucleotide sequence