Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6265

Experiment: YNB Glucose 75mM Arginine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14632 and 14633 are separated by 371 nucleotides mRNA_6264: 14632 - KOG1550 Extracellular protein SEL-1 and related proteins, at 392,784 to 393,598 14632 mRNA_6265: 14633 - K07897 RAB7A Ras-related protein Rab-7A, at 393,970 to 395,012 14633

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
remove
393,130 - 14632 mRNA_6264 0.42 -0.5
393,395 - 14632 mRNA_6264 0.75 -0.8
393,462 + 14632 mRNA_6264 0.83 +2.2
393,888 - -1.3
395,024 + +0.7
395,159 + +1.0
395,176 - -0.7
395,193 + -0.7
395,313 + -0.2

Or see this region's nucleotide sequence