Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6733

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15101 and 15102 are separated by 133 nucleotides mRNA_6733: 15101 - KOG4412 26S proteasome regulatory complex, subunit PSMD10, at 20,964 to 21,791 15101 mRNA_6734: 15102 - Hypothetical Protein, at 21,925 to 24,629 15102

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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19,984 + -0.5
19,992 + +0.5
20,004 - +2.1
20,137 - +0.6
20,171 + -1.4
20,288 + +0.5
20,457 - -1.6
20,539 + -0.2
20,571 + +1.6
20,585 - +1.0
20,586 + +1.1
20,597 - -0.4
20,604 + +1.3
20,604 + -0.7
20,632 + +0.5
20,723 - +0.9
20,735 - +0.4
20,766 + +0.7
20,777 - +1.2
20,786 + -0.6
20,922 + +0.6
21,068 - 15101 mRNA_6733 0.13 -0.1
21,083 + 15101 mRNA_6733 0.14 +0.6
21,112 + 15101 mRNA_6733 0.18 +2.1
21,192 + 15101 mRNA_6733 0.28 +0.7
21,204 - 15101 mRNA_6733 0.29 -0.5
21,226 + 15101 mRNA_6733 0.32 -1.7
21,348 - 15101 mRNA_6733 0.46 -0.4
21,502 - 15101 mRNA_6733 0.65 +0.8
21,506 - 15101 mRNA_6733 0.65 +0.4
21,934 + +1.3
22,070 + +0.3
22,246 - 15102 mRNA_6734 0.12 -1.5
22,246 + 15102 mRNA_6734 0.12 -0.2
22,363 - 15102 mRNA_6734 0.16 +1.7
22,588 + 15102 mRNA_6734 0.25 -0.1
22,729 + 15102 mRNA_6734 0.30 +1.5

Or see this region's nucleotide sequence