Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6821

Experiment: YNB Glucose 75mM Arginine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15188 and 15189 are separated by 184 nucleotides15189 and 15190 are separated by 325 nucleotides15190 and 15191 are separated by 40 nucleotides mRNA_6820: 15188 - K00931 proB glutamate 5-kinase, at 207,707 to 209,492 15188 mRNA_6821: 15189 - K07739 ELP3, KAT9 elongator complex protein 3, at 209,677 to 212,045 15189 mRNA_6822: 15190 - K20303 TRAPPC4, TRS23 trafficking protein particle complex subunit 4, at 212,371 to 212,952 15190 mRNA_6823: 15191 - BLAST TNFR/NGFR cysteine-rich region family protein [Rh..., at 212,993 to 213,573 15191

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
remove
210,325 + 15189 mRNA_6821 0.27 +0.4
210,496 + 15189 mRNA_6821 0.35 +1.3
210,567 + 15189 mRNA_6821 0.38 +0.8
210,597 + 15189 mRNA_6821 0.39 +1.1
210,606 - 15189 mRNA_6821 0.39 +1.6
210,612 + 15189 mRNA_6821 0.39 +1.8
210,615 - 15189 mRNA_6821 0.40 +0.1
210,843 - 15189 mRNA_6821 0.49 +0.6
211,300 + 15189 mRNA_6821 0.69 -0.7
211,420 + 15189 mRNA_6821 0.74 +0.6
211,490 - 15189 mRNA_6821 0.77 -2.5
211,623 + 15189 mRNA_6821 0.82 -0.0
212,365 - +2.2

Or see this region's nucleotide sequence