Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6974

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15341 and 15342 are separated by 136 nucleotides15342 and 15343 are separated by 656 nucleotides mRNA_6973: 15341 - K11303 HAT1, KAT1 histone acetyltransferase 1, at 572,592 to 574,305 15341 mRNA_6974: 15342 - K17686 copA, ATP7 Cu+-exporting ATPase, at 574,442 to 577,802 15342 mRNA_6975: 15343 - Hypothetical Protein, at 578,459 to 580,488 15343

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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573,705 - 15341 mRNA_6973 0.65 +0.6
574,136 + -0.3
574,478 + +0.5
577,638 + -2.1
577,663 - +0.3
577,670 + -1.4
577,803 + +2.2
577,804 - +0.6
577,814 + +1.5
577,933 + +1.2
577,950 - +0.5
577,958 + -0.2
577,962 + +0.3
577,964 + -2.1
577,967 + +0.9
577,977 + +1.5
577,981 - -0.6
577,981 + -0.3
578,087 - +1.2
578,110 + +0.9
578,327 + -0.7
578,418 - +0.1
578,715 + 15343 mRNA_6975 0.13 +0.9

Or see this region's nucleotide sequence