Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7027

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15394 and 15395 are separated by 263 nucleotides15395 and 15396 are separated by 310 nucleotides mRNA_7026: 15394 - K12827 SF3A3, SAP61, PRP9 splicing factor 3A subunit 3, at 703,087 to 704,939 15394 mRNA_7027: 15395 - K13025 EIF4A3, FAL1 ATP-dependent RNA helicase, at 705,203 to 707,269 15395 mRNA_7028: 15396 - SUPERFAMILY--SSF81383, at 707,580 to 708,539 15396

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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704,955 - +0.2
705,124 - +1.3
707,514 - +0.9
708,035 - 15396 mRNA_7028 0.47 +0.7
708,169 + 15396 mRNA_7028 0.61 -0.1

Or see this region's nucleotide sequence