Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7063

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15430 and 15431 are separated by 11 nucleotides mRNA_7062: 15430 - HMMPfam-N-acetyltransferase-PF00797,SUPERFAMILY--SSF54001, at 792,528 to 793,710 15430 mRNA_7063: 15431 - Hypothetical Protein, at 793,722 to 794,198 15431

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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792,941 - 15430 mRNA_7062 0.35 -0.5
792,957 + 15430 mRNA_7062 0.36 -0.2
793,128 + 15430 mRNA_7062 0.51 +0.2
793,221 - 15430 mRNA_7062 0.59 +0.5
793,683 + -0.2
793,693 + +2.8
793,714 - -0.1
793,873 + 15431 mRNA_7063 0.32 +1.3
793,966 + 15431 mRNA_7063 0.51 +1.0
794,433 - +0.0
794,435 + +0.8
794,582 + +0.6
794,724 - +0.5

Or see this region's nucleotide sequence