Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7088

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15455 and 15456 are separated by 790 nucleotides mRNA_7087: 15455 - Hypothetical Protein, at 851,570 to 853,119 15455 mRNA_7088: 15456 - K10739 RFA2, RPA2 replication factor A2, at 853,910 to 855,078 15456

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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853,184 - +1.0
853,808 + -0.9
855,319 + +1.0
855,330 + +1.8
855,422 - +0.5
855,437 + +0.4
855,439 + -0.3
855,881 - +0.2

Or see this region's nucleotide sequence