Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7184

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15551 and 15552 are separated by 520 nucleotides15552 and 15553 are separated by 140 nucleotides mRNA_7183: 15551 - Hypothetical Protein, at 1,068,155 to 1,071,791 15551 mRNA_7184: 15552 - K02219 CKS1 cyclin-dependent kinase regulatory subunit CKS1, at 1,072,312 to 1,073,593 15552 mRNA_7185: 15553 - K07300 chaA, CAX Ca2+-H+ antiporter, at 1,073,734 to 1,075,504 15553

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,071,481 + -0.4
1,071,485 - +1.3
1,071,487 - -0.2
1,071,669 - -0.6
1,071,673 + -0.9
1,071,823 + +0.8
1,071,828 + -0.1
1,072,094 + -0.5
1,072,112 - +0.4
1,072,119 + -0.8
1,072,252 - -0.3
1,072,255 + +0.0
1,072,262 + +2.0
1,072,446 - 15552 mRNA_7184 0.10 -0.3
1,072,546 - 15552 mRNA_7184 0.18 +0.8
1,072,582 - 15552 mRNA_7184 0.21 +1.6
1,072,684 + 15552 mRNA_7184 0.29 -0.6
1,072,826 + 15552 mRNA_7184 0.40 -0.4
1,072,995 + 15552 mRNA_7184 0.53 -0.5
1,073,070 + 15552 mRNA_7184 0.59 +2.0
1,073,276 + 15552 mRNA_7184 0.75 +0.5
1,073,280 - 15552 mRNA_7184 0.76 +1.9
1,073,412 - 15552 mRNA_7184 0.86 +0.9
1,073,443 - 15552 mRNA_7184 0.88 +0.6
1,073,583 - +0.7
1,073,783 + -2.3
1,073,852 - -0.4
1,073,996 + 15553 mRNA_7185 0.15 -0.1
1,074,298 - 15553 mRNA_7185 0.32 -0.1

Or see this region's nucleotide sequence