Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7240

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15607 and 15608 are separated by 354 nucleotides15608 and 15609 are separated by 155 nucleotides mRNA_7239: 15607 - Hypothetical Protein, at 1,198,492 to 1,200,248 15607 mRNA_7240: 15608 - Hypothetical Protein, at 1,200,603 to 1,202,744 15608 mRNA_7241: 15609 - K01265 map methionyl aminopeptidase, at 1,202,900 to 1,205,057 15609

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,200,121 + +1.6
1,200,274 - +0.1
1,200,517 + +0.1
1,200,618 + +0.4
1,200,817 - +1.1
1,201,246 - 15608 mRNA_7240 0.30 -0.9
1,201,379 + 15608 mRNA_7240 0.36 -1.5
1,201,456 + 15608 mRNA_7240 0.40 +0.7
1,201,596 - 15608 mRNA_7240 0.46 +2.0
1,201,632 - 15608 mRNA_7240 0.48 +0.1
1,201,701 + 15608 mRNA_7240 0.51 +0.5
1,202,005 - 15608 mRNA_7240 0.65 -1.3
1,202,011 + 15608 mRNA_7240 0.66 +0.4
1,202,431 + 15608 mRNA_7240 0.85 -0.2
1,202,487 + 15608 mRNA_7240 0.88 -0.1
1,202,794 + +1.2
1,203,016 + +1.1
1,203,424 + 15609 mRNA_7241 0.24 -0.1

Or see this region's nucleotide sequence