Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7453

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15820 and 15821 are separated by 195 nucleotides15821 and 15822 are separated by 189 nucleotides mRNA_7452: 15820 - K14852 RRS1 regulator of ribosome biosynthesis, at 309,370 to 310,696 15820 mRNA_7453: 15821 - K14407 CSTF2, RNA15 cleavage stimulation factor subunit 2, at 310,892 to 312,649 15821 mRNA_7454: 15822 - K01412 PMPCA, MAS2 mitochondrial-processing peptidase subunit alpha, at 312,839 to 314,664 15822

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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310,646 + -1.0
310,653 + -0.3
310,669 + +1.4
310,670 - +0.2
310,682 - +1.3
310,685 + +0.6
312,241 + 15821 mRNA_7453 0.77 -0.8
312,743 + +2.3

Or see this region's nucleotide sequence