Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7732

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16099 and 16100 are separated by 812 nucleotides16100 and 16101 are separated by 682 nucleotides mRNA_7731: 16099 - Hypothetical Protein, at 947,263 to 948,324 16099 mRNA_7732: 16100 - Hypothetical Protein, at 949,137 to 950,100 16100 mRNA_7733: 16101 - HMMPfam-DinB superfamily-PF12867, at 950,783 to 951,558 16101

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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948,320 - +1.1
948,329 + +0.2
948,419 + -0.3
948,436 - +0.1
948,495 - +1.8
948,788 + +0.0
949,378 + 16100 mRNA_7732 0.25 +0.9
949,679 - 16100 mRNA_7732 0.56 +0.3
949,833 + 16100 mRNA_7732 0.72 +0.8
949,915 + 16100 mRNA_7732 0.81 -0.4
949,969 + 16100 mRNA_7732 0.86 +1.1
950,230 + -1.5
950,231 - -0.3
950,244 - +1.0
950,249 - -0.2
950,252 + +1.5
950,390 - +0.3
950,394 - +1.4
950,436 + +1.5
950,514 - -0.8
950,539 + -0.4
950,539 + +0.6
950,560 - +0.2
950,560 - +0.2
950,561 - -0.8
950,561 - +0.8
950,571 + +1.2
950,582 - -1.2
950,840 + +0.1
950,851 + +0.6
950,855 - -0.0
950,867 - 16101 mRNA_7733 0.11 +1.1
950,994 + 16101 mRNA_7733 0.27 -0.3
951,014 + 16101 mRNA_7733 0.30 -1.4

Or see this region's nucleotide sequence