Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7749

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16117 and 16118 overlap by 11 nucleotides mRNA_7749: 16117 - Hypothetical Protein, at 981,681 to 982,227 16117 mRNA_7750: 16118 - Hypothetical Protein, at 982,217 to 982,643 16118

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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980,794 - +0.1
980,908 + +2.7
981,051 + +0.9
981,218 + +2.3
981,222 + +0.8
981,224 + -0.7
981,224 + +0.3
981,370 + +0.4
981,647 - +1.0
981,657 - +0.2
981,679 - +0.3
981,828 + 16117 mRNA_7749 0.27 -4.2
981,946 - 16117 mRNA_7749 0.48 +0.1
981,983 - 16117 mRNA_7749 0.55 +1.8
982,244 - -0.0
982,362 - 16118 mRNA_7750 0.34 +0.3
982,392 - 16118 mRNA_7750 0.41 +0.1
982,434 - 16118 mRNA_7750 0.51 +0.6
982,533 + 16118 mRNA_7750 0.74 -1.4
982,668 + +0.6
982,884 - +0.7

Or see this region's nucleotide sequence