Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8088

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16455 and 16456 are separated by 296 nucleotides16456 and 16457 are separated by 317 nucleotides mRNA_8087: 16455 - ProSiteProfiles-BRCT domain profile.-PS50172,SUPERFAMILY--SSF52113, at 390,776 to 392,470 16455 mRNA_8088: 16456 - Hypothetical Protein, at 392,767 to 393,298 16456 mRNA_8089: 16457 - Hypothetical Protein, at 393,616 to 394,916 16457

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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392,470 - -0.4
393,678 - +0.8

Or see this region's nucleotide sequence