Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8178

Experiment: YNB Glucose 75mM Arginine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16545 and 16546 are separated by 128 nucleotides mRNA_8177: 16545 - Hypothetical Protein, at 605,044 to 605,937 16545 mRNA_8178: 16546 - Hypothetical Protein, at 606,066 to 607,018 16546

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
remove
605,082 + -1.0
605,147 - 16545 mRNA_8177 0.12 -1.1
605,443 + 16545 mRNA_8177 0.45 -0.1
605,560 - 16545 mRNA_8177 0.58 +1.6
605,870 - -0.6
606,064 - -0.4
606,283 - 16546 mRNA_8178 0.23 +0.7
607,048 + -1.0
607,051 - +0.4
607,068 + +0.6
607,351 - +1.0
607,491 - -2.6
607,498 + +0.6
607,654 + -0.0
607,682 + +0.5
607,692 + +0.1
607,718 + -0.6
607,723 + -0.5
607,725 + +0.1
607,726 - +0.6
607,728 - +0.2
607,731 + -0.2
607,766 - +1.0
607,770 - +1.7
607,771 + +0.6
607,773 + -0.4
607,773 + -0.1
607,805 + -0.2
607,814 + +0.2
607,815 + +0.0
607,829 + +1.1
607,833 - +0.2
607,844 - +0.5
607,848 + -0.3
607,851 - -0.4
607,869 - -0.2
607,879 - +1.4
607,911 - +1.1
607,943 + +0.3
607,947 - -1.9
607,947 + +0.8
607,956 - +1.7
607,957 + +2.6
607,968 - +0.3
607,969 - +1.1
607,976 + +1.5
607,985 - +0.3
608,012 - +0.1

Or see this region's nucleotide sequence