Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8225

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16592 and 16593 are separated by 265 nucleotides mRNA_8224: 16592 - K00948 PRPS, prsA ribose-phosphate pyrophosphokinase, at 709,564 to 711,429 16592 mRNA_8225: 16593 - HMMPfam-DSBA-like thioredoxin domain-PF01323,SUPERFAMILY--SSF52833, at 711,695 to 712,857 16593

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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711,879 - 16593 mRNA_8225 0.16 -0.8
712,125 - 16593 mRNA_8225 0.37 +2.0
712,450 - 16593 mRNA_8225 0.65 -0.1
712,610 - 16593 mRNA_8225 0.79 +1.4
712,872 - -1.1
712,873 + -0.3
712,875 + -0.2
712,878 + -0.0
712,884 + +0.8
712,895 + +0.7
712,980 - -0.9
712,984 + +0.3
713,070 + -0.0
713,077 - +0.2
713,083 - -0.0
713,097 + -1.7
713,125 + -0.3
713,515 - -0.1

Or see this region's nucleotide sequence