Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_9

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8377 and 8378 are separated by 267 nucleotides mRNA_9: 8377 - Hypothetical Protein, at 28,711 to 29,599 8377 mRNA_10: 8378 - Hypothetical Protein, at 29,867 to 30,741 8378

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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27,787 - +2.3
27,857 - +1.1
28,321 - +1.1
28,630 + -0.2
28,636 + +0.9
28,737 + -0.3
28,937 + 8377 mRNA_9 0.25 +0.4
29,049 - 8377 mRNA_9 0.38 +0.0
29,062 - 8377 mRNA_9 0.39 +0.3
29,112 + 8377 mRNA_9 0.45 +0.4
29,220 - 8377 mRNA_9 0.57 +2.0
29,316 + 8377 mRNA_9 0.68 +0.4
29,501 + 8377 mRNA_9 0.89 +0.3
29,659 + +0.8
29,931 - +0.2
29,938 + -0.8
29,943 - +0.0
30,094 - 8378 mRNA_10 0.26 +1.3
30,106 + 8378 mRNA_10 0.27 +0.6
30,136 + 8378 mRNA_10 0.31 +0.2
30,170 - 8378 mRNA_10 0.35 +0.5
30,178 + 8378 mRNA_10 0.36 -0.1
30,369 + 8378 mRNA_10 0.57 +2.0

Or see this region's nucleotide sequence