Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_294

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8661 and 8662 are separated by 603 nucleotides8662 and 8663 are separated by 231 nucleotides mRNA_293: 8661 - Hypothetical Protein, at 693,672 to 694,229 8661 mRNA_294: 8662 - Hypothetical Protein, at 694,833 to 695,851 8662 mRNA_295: 8663 - KOG3069 Peroxisomal NUDIX hydrolase, at 696,083 to 698,097 8663

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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694,051 - 8661 mRNA_293 0.68 -0.5
694,216 + +0.5
694,343 + +0.6
694,349 + +0.7
694,382 - -0.3
694,553 - -2.8
694,637 + +0.1
694,650 + -0.1
694,652 - +1.3
694,971 + 8662 mRNA_294 0.14 -0.4
695,838 - +1.2
695,949 - -0.4
695,975 - +1.8
696,010 - +0.3
696,038 + +0.1
696,272 - +1.3
696,560 - 8663 mRNA_295 0.24 -0.5
696,579 - 8663 mRNA_295 0.25 -0.9
696,735 - 8663 mRNA_295 0.32 -0.1

Or see this region's nucleotide sequence