Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_491

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8858 and 8859 are separated by 408 nucleotides8859 and 8860 are separated by 32 nucleotides mRNA_490: 8858 - SUPERFAMILY--SSF52058, at 1,164,035 to 1,165,589 8858 mRNA_491: 8859 - K00850 pfkA, PFK 6-phosphofructokinase 1, at 1,165,998 to 1,167,980 8859 mRNA_492: 8860 - KOG0908 Thioredoxin-like protein, at 1,168,013 to 1,168,885 8860

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,166,739 - 8859 mRNA_491 0.37 +0.7
1,167,855 - +1.9
1,167,863 - -0.4

Or see this region's nucleotide sequence