Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_492

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8859 and 8860 are separated by 32 nucleotides8860 and 8861 are separated by 216 nucleotides mRNA_491: 8859 - K00850 pfkA, PFK 6-phosphofructokinase 1, at 1,165,998 to 1,167,980 8859 mRNA_492: 8860 - KOG0908 Thioredoxin-like protein, at 1,168,013 to 1,168,885 8860 mRNA_493: 8861 - Hypothetical Protein, at 1,169,102 to 1,170,018 8861

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,167,855 - +1.9
1,167,863 - -0.4

Or see this region's nucleotide sequence