Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_669

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9036 and 9037 are separated by 667 nucleotides9037 and 9038 are separated by 873 nucleotides mRNA_668: 9036 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 1,609,196 to 1,610,811 9036 mRNA_669: 9037 - K01689 ENO, eno enolase, at 1,611,479 to 1,614,227 9037 mRNA_670: 9038 - Hypothetical Protein, at 1,615,101 to 1,618,146 9038

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,610,568 - 9036 mRNA_668 0.85 +0.8
1,610,578 + 9036 mRNA_668 0.86 -0.1
1,610,579 + 9036 mRNA_668 0.86 +0.7
1,610,603 + 9036 mRNA_668 0.87 -2.1
1,610,725 - +0.4
1,610,827 - +2.1
1,610,859 - +2.5
1,610,893 + -0.4
1,610,915 - +0.7
1,610,932 - +0.5
1,611,075 + -0.2
1,611,192 + +0.3
1,611,192 + -1.6
1,611,192 - +1.1
1,611,243 + -0.2
1,611,348 + +0.7
1,611,444 - -1.5
1,611,450 + +0.4
1,611,453 - +0.2
1,611,458 + +0.2
1,611,460 + -0.7
1,611,498 - +0.8
1,611,504 - -0.1
1,611,507 + -0.3
1,611,512 - -0.0
1,611,569 - +0.9
1,611,617 + +0.9
1,611,624 - +0.5
1,611,645 + +0.0
1,611,664 + +0.2
1,611,664 - -0.5
1,614,263 + +0.4
1,614,322 - +0.5
1,614,371 - -0.3
1,614,396 - +0.1
1,614,409 + -0.7
1,614,410 + +0.4
1,614,415 - +2.8
1,614,557 + -0.4
1,614,576 - +0.1
1,614,603 + +0.9
1,614,603 + -0.3
1,614,606 - -0.2
1,614,611 - +0.9
1,614,612 + -0.1
1,614,617 + +0.3
1,614,640 - +0.4
1,614,644 + -0.7
1,614,664 + +0.4
1,614,696 - +0.4
1,614,712 + +0.7
1,614,747 + +0.7
1,614,757 - +0.0
1,614,824 - -1.0
1,614,832 + -0.1
1,614,832 - +0.9
1,614,836 - -0.1
1,614,843 - +1.4
1,614,844 + +0.2
1,614,985 + +0.4
1,614,987 - -0.6
1,614,987 + +0.3
1,614,993 + +0.4
1,614,994 + -0.0
1,615,017 - +0.5

Or see this region's nucleotide sequence