Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_712

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9079 and 9080 are separated by 210 nucleotides mRNA_711: 9079 - K00972 UAP1 UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase, at 1,700,499 to 1,702,038 9079 mRNA_712: 9080 - KOG4103 Mitochondrial F1F0-ATP synthase, subunit g/ATP20, at 1,702,249 to 1,703,188 9080

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,702,209 - -0.7
1,702,649 + 9080 mRNA_712 0.43 -1.7
1,703,221 - +0.8
1,703,266 + -0.7
1,703,275 + +0.0
1,703,975 - +0.2
1,704,004 - +0.6

Or see this region's nucleotide sequence