Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_809

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9176 and 9177 are separated by 663 nucleotides9177 and 9178 are separated by 622 nucleotides mRNA_808: 9176 - K00053 ilvC ketol-acid reductoisomerase, at 1,921,061 to 1,923,091 9176 mRNA_809: 9177 - HMMPfam-Acetohydroxy acid isomeroreductase, catalytic domain-PF01450,SUPERFAMILY--SSF48179, at 1,923,755 to 1,924,873 9177 mRNA_810: 9178 - HMMPfam-Acetohydroxy acid isomeroreductase, catalytic domain-PF01450,SUPERFAMILY--SSF48179, at 1,925,496 to 1,926,614 9178

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,923,341 - -0.5
1,923,345 - -2.9
1,923,425 + +0.5

Or see this region's nucleotide sequence