Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1196

Experiment: YNB Glucose 75mM Arginine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9563 and 9564 are separated by 792 nucleotides mRNA_1195: 9563 - K03248 EIF3G translation initiation factor 3 subunit G, at 624,077 to 625,434 9563 mRNA_1196: 9564 - HMMPfam-Membrane bound O-acyl transferase family-PF13813, at 626,227 to 627,477 9564

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
remove
625,859 + +2.0
625,874 - +1.8
625,994 + +0.1
626,006 - +1.3
626,007 - -1.8
626,008 + +0.7
626,015 + +0.3
626,042 + +2.7
626,135 - -0.0
626,246 + +0.7
626,299 - -0.0
626,427 + 9564 mRNA_1196 0.16 -0.5
626,707 - 9564 mRNA_1196 0.38 -0.4
626,729 + 9564 mRNA_1196 0.40 -0.4
626,876 + 9564 mRNA_1196 0.52 -0.3
627,005 + 9564 mRNA_1196 0.62 -1.1
627,254 + 9564 mRNA_1196 0.82 +0.2
627,453 - +0.2
627,786 - +2.5
627,872 + -0.2
627,987 + +0.0
628,004 + +0.7
628,200 + +0.4
628,266 + +1.5
628,314 - -0.2
628,325 - +2.3
628,326 + +0.0
628,328 - -0.6
628,332 - +0.2
628,344 - -0.4
628,432 - -1.5
628,448 - +0.1

Or see this region's nucleotide sequence