Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1357

Experiment: YNB Glucose 75mM Arginine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9725 and 9726 are separated by 198 nucleotides mRNA_1357: 9725 - BLAST ATP-citrate synthase [Microbotryum lychnidis-dioicae ..., at 79,515 to 80,146 9725 mRNA_1358: 9726 - K01648 ACLY ATP citrate (pro-S)-lyase, at 80,345 to 84,761 9726

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
remove
78,788 + +1.1
78,988 + +0.2
79,074 - +1.0
79,097 + +0.2
79,213 - +0.2
79,234 + +0.2
79,373 - +2.0
79,423 + +1.6
79,756 - 9725 mRNA_1357 0.38 -0.1
79,851 + 9725 mRNA_1357 0.53 +0.1
80,007 + 9725 mRNA_1357 0.78 +0.4
80,028 + 9725 mRNA_1357 0.81 -0.3
80,181 - +1.1
80,187 - -0.1
80,316 + -0.2
80,318 - -0.4

Or see this region's nucleotide sequence