Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1395

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_1395: 9763 - K07756 IP6K, IHPK inositol-hexakisphosphate 5-kinase, at 166,519 to 170,946 9763

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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165,693 - +1.3
165,772 - +0.2
165,835 + -0.6
165,942 - +1.8
166,334 - -0.0
169,339 + 9763 mRNA_1395 0.64 +1.0
169,697 - 9763 mRNA_1395 0.72 -0.7
169,840 + 9763 mRNA_1395 0.75 +1.1
169,997 - 9763 mRNA_1395 0.79 +0.5
170,035 - 9763 mRNA_1395 0.79 -0.3
170,041 + 9763 mRNA_1395 0.80 -2.9
170,145 + 9763 mRNA_1395 0.82 +0.9
170,151 - 9763 mRNA_1395 0.82 +0.8
170,173 + 9763 mRNA_1395 0.83 -1.1
170,207 + 9763 mRNA_1395 0.83 +1.0
170,209 + 9763 mRNA_1395 0.83 +1.5
170,328 + 9763 mRNA_1395 0.86 +0.2
170,459 - 9763 mRNA_1395 0.89 +0.9
170,465 + 9763 mRNA_1395 0.89 -0.7
171,053 + +0.2
171,066 - -0.1
171,340 - +0.1
171,513 - +2.2
171,624 - +1.0
171,646 - +0.5
171,652 - +1.5
171,654 - +2.0
171,922 + -0.4
171,923 + +0.7
171,934 + -0.7
171,936 - -0.1
171,937 + -0.2

Or see this region's nucleotide sequence