Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1396

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9764 and 9765 are separated by 278 nucleotides mRNA_1396: 9764 - Hypothetical Protein, at 172,419 to 173,406 9764 mRNA_1397: 9765 - K03242 EIF2S3 translation initiation factor 2 subunit 3, at 173,685 to 176,206 9765

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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171,513 - +2.2
171,624 - +1.0
171,646 - +0.5
171,652 - +1.5
171,654 - +2.0
171,922 + -0.4
171,923 + +0.7
171,934 + -0.7
171,936 - -0.1
171,937 + -0.2
171,953 + +1.1
172,056 - +0.8
172,797 - 9764 mRNA_1396 0.38 +0.6
172,804 + 9764 mRNA_1396 0.39 -0.5
172,907 + 9764 mRNA_1396 0.49 +1.6
172,969 - 9764 mRNA_1396 0.56 +0.2
173,113 - 9764 mRNA_1396 0.70 +1.0
173,270 - 9764 mRNA_1396 0.86 -0.4
173,376 - +0.7

Or see this region's nucleotide sequence