Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1482

Experiment: YNB Glucose 75mM Arginine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9850 and 9851 are separated by 278 nucleotides mRNA_1482: 9850 - BLAST zn -c6 transcription factor [Malassezia pachyderm..., at 409,012 to 409,512 9850 mRNA_1483: 9851 - BLAST Protein priB [Grifola frondosa], at 409,791 to 410,399 9851

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
remove
408,243 + +0.5
408,428 - -0.9
408,570 - +1.1
408,571 + +1.1
408,592 - -0.7
408,625 + +1.5
408,654 + +2.4
408,781 + -2.2
408,933 - +0.3
409,093 + 9850 mRNA_1482 0.16 +0.8
409,229 + 9850 mRNA_1482 0.43 +0.2
409,381 + 9850 mRNA_1482 0.74 +0.8
409,431 - 9850 mRNA_1482 0.84 +0.9
409,456 + 9850 mRNA_1482 0.89 +0.1
409,496 - -0.4
409,527 - -0.3
409,582 + +0.2
409,737 + -1.3
409,783 + +0.7
410,170 - 9851 mRNA_1483 0.62 -2.8

Or see this region's nucleotide sequence