Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1786

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10153 and 10154 are separated by 185 nucleotides10154 and 10155 are separated by 414 nucleotides mRNA_1785: 10153 - K04077 groEL, HSPD1 chaperonin GroEL, at 204,844 to 206,779 10153 mRNA_1786: 10154 - K04078 groES, HSPE1 chaperonin GroES, at 206,965 to 207,485 10154 mRNA_1787: 10155 - HMMPfam-Tctex-1 family-PF03645, at 207,900 to 208,690 10155

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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206,851 - -0.2
206,856 + +0.0
206,859 - +0.1
206,860 + -0.6
206,870 + +1.4
206,873 + +0.8
206,883 + +0.3
207,747 - +0.9
208,042 - 10155 mRNA_1787 0.18 +2.0
208,176 - 10155 mRNA_1787 0.35 -1.2
208,349 - 10155 mRNA_1787 0.57 +0.2
208,476 - 10155 mRNA_1787 0.73 -0.1

Or see this region's nucleotide sequence