Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1853

Experiment: Dropout Complete

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10220 and 10221 are separated by 511 nucleotides10221 and 10222 are separated by 161 nucleotides mRNA_1852: 10220 - K06133 LYS5, acpT 4'-phosphopantetheinyl transferase, at 376,283 to 377,328 10220 mRNA_1853: 10221 - KOG4147 Uncharacterized conserved protein, at 377,840 to 378,489 10221 mRNA_1854: 10222 - Hypothetical Protein, at 378,651 to 380,549 10222

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
remove
377,337 - +0.6
377,357 + +0.7
377,486 + -0.8
377,486 + -1.4
377,637 - -3.0
378,636 - -0.8
378,652 - -2.6
378,663 - -1.4
378,798 + +1.2
378,958 + 10222 mRNA_1854 0.16 -1.1
379,013 - 10222 mRNA_1854 0.19 +0.4
379,251 + 10222 mRNA_1854 0.32 +0.1
379,260 + 10222 mRNA_1854 0.32 +0.1
379,395 - 10222 mRNA_1854 0.39 +0.2

Or see this region's nucleotide sequence