Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2032

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10400 and 10401 are separated by 674 nucleotides mRNA_2032: 10400 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 794,820 to 796,212 10400 mRNA_2033: 10401 - K09595 HM13 minor histocompatibility antigen H13, at 796,887 to 798,543 10401

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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794,153 + -1.3
794,890 - +0.6
794,892 + +0.2
795,020 + 10400 mRNA_2032 0.14 -0.6
795,530 + 10400 mRNA_2032 0.51 -0.0
795,875 + 10400 mRNA_2032 0.76 +0.2
795,918 + 10400 mRNA_2032 0.79 +0.2
796,025 + 10400 mRNA_2032 0.87 +0.1
796,091 - +1.7
796,206 - +0.7
796,370 - -0.5
796,529 + +0.7
796,670 + +0.4
796,694 - +0.3
797,120 + 10401 mRNA_2033 0.14 -0.1

Or see this region's nucleotide sequence