Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2323

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10691 and 10692 are separated by 49 nucleotides mRNA_2323: 10691 - Hypothetical Protein, at 610,976 to 611,573 10691 mRNA_2324: 10692 - KOG1483 Zn2+ transporter ZNT1 and related Cd2+/Zn2+ transporters (cation diffusion facilitator superfamily), at 611,623 to 612,935 10692

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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610,012 + +0.9
610,026 + +0.5
610,036 - +1.4
610,042 - -0.8
610,043 + +1.7
610,045 - -0.6
610,045 - -0.6
610,046 + -1.1
610,075 + +1.2
610,087 + -0.1
610,087 - -0.1
610,091 + +0.4
610,095 + +0.8
610,096 + +0.8
610,097 - -0.4
610,100 + +1.2
610,103 - +1.9
610,104 - +0.7
610,106 - -1.0
610,107 + -1.0
610,111 - +1.1
610,114 + -0.2
610,114 - +1.5
610,117 - -1.1
610,120 + -2.3
610,120 - +0.1
610,122 + +2.0
610,126 + -0.2
610,129 - -0.7
610,129 + -0.8
610,129 + +0.4
610,129 + +0.4
610,135 + -0.2
610,141 - -1.0
610,144 + -0.2
610,146 + -2.8
610,149 + +0.6
610,149 + +0.5
610,153 + +0.9
610,154 - +1.0
610,169 - +0.5
610,181 - +0.6
610,182 - +1.2
610,185 - +0.2
610,187 - +0.3
610,188 - +0.6
610,190 - +0.1
610,190 - +1.1
610,194 - -1.6
610,194 + -0.7
610,208 - -0.2
610,216 + +0.3
610,245 - +0.7
610,257 + +0.5
610,301 - -1.0
610,311 + -0.7
610,315 - +1.2
610,323 - +0.7
610,356 + -0.4
610,365 - -0.6
610,385 - +1.9
610,415 - +2.3
610,439 - +1.4
610,460 - +1.8
610,466 - +1.1
610,467 - +0.9
610,477 - +0.3
610,477 - +0.5
610,489 + -0.5
610,506 + -0.7
610,518 - +0.8
610,537 - +0.3
610,558 - -0.1
610,589 - +0.7
610,606 + -0.2
610,610 - +0.9
610,650 + +2.3
610,723 + -1.3
610,756 - +2.9
610,778 - +1.8
610,781 - -0.5
610,881 + +1.2
610,888 - +1.0
610,941 + +0.5
611,083 + 10691 mRNA_2323 0.18 -0.1
611,510 - 10691 mRNA_2323 0.89 -0.0
611,551 - +0.2
611,664 + +1.0
611,812 - 10692 mRNA_2324 0.14 +0.7
612,252 + 10692 mRNA_2324 0.48 -1.4
612,254 + 10692 mRNA_2324 0.48 -0.1

Or see this region's nucleotide sequence