Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2935

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11302 and 11303 are separated by 914 nucleotides mRNA_2934: 11302 - Hypothetical Protein, at 585,231 to 585,949 11302 mRNA_2935: 11303 - Hypothetical Protein, at 586,864 to 587,457 11303

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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585,880 + +0.5
586,336 - -0.4
586,357 - +1.1
586,366 + +2.0
586,564 + +0.5
586,692 + -0.5
586,785 + +0.6
586,787 + -1.1
587,063 - 11303 mRNA_2935 0.34 -0.3
587,227 - 11303 mRNA_2935 0.61 +0.4
587,253 - 11303 mRNA_2935 0.65 +1.2
587,257 + 11303 mRNA_2935 0.66 +1.1
587,378 - 11303 mRNA_2935 0.87 -0.1
587,390 + 11303 mRNA_2935 0.89 +0.2
587,516 - -1.7
587,534 + -0.7
587,535 - -0.6
587,540 + +0.0
587,542 - -1.7
587,570 - +0.1
587,627 + +0.6
587,839 - +2.3
587,948 + +0.4
588,075 - +0.4

Or see this region's nucleotide sequence