Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2966

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11333 and 11334 are separated by 392 nucleotides11334 and 11335 are separated by 750 nucleotides mRNA_2965: 11333 - KOG1721 FOG Zn-finger, at 666,702 to 669,525 11333 mRNA_2966: 11334 - KOG3238 Chloride ion current inducer protein, at 669,918 to 671,056 11334 mRNA_2967: 11335 - Hypothetical Protein, at 671,807 to 673,227 11335

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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669,037 - 11333 mRNA_2965 0.83 -0.7
669,079 - 11333 mRNA_2965 0.84 -1.6
669,089 + 11333 mRNA_2965 0.85 -1.1
669,245 + -1.9
669,552 - +2.0
670,994 + +1.5
671,084 + +0.1
671,169 + +0.6
671,172 - +1.3
671,172 - +2.7
671,174 + +0.5
671,176 - +0.9
671,178 + +1.1
671,281 + -0.8
671,288 - +2.0
671,600 - -1.1
671,708 - +2.6
671,735 + +0.1
671,738 - -0.3
671,748 + +0.5
671,845 + +0.8
671,893 + +0.7
671,901 + +1.4
671,901 + +2.6
671,902 + +1.3
671,999 + 11335 mRNA_2967 0.14 +1.3
672,000 - 11335 mRNA_2967 0.14 +1.8
672,010 + 11335 mRNA_2967 0.14 +0.4
672,049 - 11335 mRNA_2967 0.17 +0.9
672,053 - 11335 mRNA_2967 0.17 +1.1
672,056 - 11335 mRNA_2967 0.18 +1.5

Or see this region's nucleotide sequence