Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2991

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11358 and 11359 are separated by 377 nucleotides11359 and 11360 are separated by 593 nucleotides mRNA_2990: 11358 - SUPERFAMILY--SSF52047, at 21,801 to 25,370 11358 mRNA_2991: 11359 - SUPERFAMILY--SSF50685, at 25,748 to 27,268 11359 mRNA_2992: 11360 - Hypothetical Protein, at 27,862 to 28,502 11360

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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25,089 + -1.2
25,386 - +0.2
25,389 - +1.0
25,415 - +0.3
25,430 + -0.5
25,430 + +0.3
25,547 - +0.6
25,560 - +0.1
25,564 - -0.3
25,565 + -0.4
25,569 - -0.3
25,582 + +1.6
25,587 - +1.5
25,588 + +0.8
25,889 - +0.0
26,023 + 11359 mRNA_2991 0.18 +1.2
26,023 + 11359 mRNA_2991 0.18 +1.0
26,148 - 11359 mRNA_2991 0.26 +0.7
26,279 - 11359 mRNA_2991 0.35 +0.6
26,297 + 11359 mRNA_2991 0.36 +1.1
26,415 - 11359 mRNA_2991 0.44 +0.6
26,631 + 11359 mRNA_2991 0.58 -0.2
26,899 + 11359 mRNA_2991 0.76 +0.7
26,941 - 11359 mRNA_2991 0.78 +0.7
27,032 + 11359 mRNA_2991 0.84 +0.3
27,036 + 11359 mRNA_2991 0.85 +0.6
27,163 + -1.4
27,297 - +0.9
27,305 - -0.4
27,327 + +0.3
27,453 + +1.4
27,474 + -0.3
27,485 + -1.9
27,500 + +0.8
27,622 - +0.4
27,774 + +2.4
27,796 + -0.2

Or see this region's nucleotide sequence