Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3216

Experiment: Dropout Complete

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11583 and 11584 are separated by 460 nucleotides mRNA_3215: 11583 - K17103 CHO1, pssA CDP-diacylglycerol---serine O-phosphatidyltransferase, at 110,757 to 112,157 11583 mRNA_3216: 11584 - K12881 THOC4, ALY THO complex subunit 4, at 112,618 to 114,116 11584

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
remove
112,251 - +1.1
112,374 + +2.7
112,390 + +1.0
112,539 - +0.9
112,543 - +2.0
112,812 - 11584 mRNA_3216 0.13 +1.8
112,834 - 11584 mRNA_3216 0.14 -2.4
112,850 - 11584 mRNA_3216 0.15 -0.3
113,424 + 11584 mRNA_3216 0.54 -0.0
113,556 + 11584 mRNA_3216 0.63 -0.1
114,323 - -1.6
114,448 + +0.6
114,561 + +0.4
114,574 + +1.1
114,759 - +0.6
114,759 - +1.5
114,929 - -0.2
114,932 + +2.5
114,938 + +0.6
114,987 + +0.2
115,069 - -0.8
115,071 - -0.3
115,072 + +0.2
115,086 + -0.2
115,088 + +0.6
115,096 + +2.7
115,101 - +0.9
115,102 + +0.3
115,103 - +0.4

Or see this region's nucleotide sequence