Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3283

Experiment: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11650 and 11651 are separated by 598 nucleotides11651 and 11652 are separated by 128 nucleotides mRNA_3282: 11650 - KOG0023 Alcohol dehydrogenase, class V, at 285,167 to 286,436 11650 mRNA_3283: 11651 - K20224 IPO9, RANBP9 importin-9, at 287,035 to 291,052 11651 mRNA_3284: 11652 - BLAST something about silencing, SAS, complex subunit 4 [Rh..., at 291,181 to 293,324 11652

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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286,119 - 11650 mRNA_3282 0.75 -1.3
286,948 + +0.3
286,962 - +0.6
286,978 + +0.3
286,980 + +0.0
287,260 - +2.6
287,409 - +0.5
287,425 + +0.1
287,711 + 11651 mRNA_3283 0.17 -1.9
287,978 + 11651 mRNA_3283 0.23 -0.2
291,082 - -0.6
291,168 + -0.4
291,456 + 11652 mRNA_3284 0.13 -0.6
291,504 + 11652 mRNA_3284 0.15 -0.7
291,893 + 11652 mRNA_3284 0.33 -1.8

Or see this region's nucleotide sequence